Package: sdmEvalToolUI 0.0.1

sdmEvalToolUI: SDM Evaluation Tool Shiny UI

The goal of sdmEvalToolUI is to implement Shiny functionality according to the SDM Evaluation Tool requirements to evaluate materials.

Authors:Peter Solymos [aut, cre], Steffi LaZerte [aut], Analythium Solutions Inc. [cph], His Majesty the King in Right of Canada as represented by the Minister of the Environment [cph], Biodiversity Pathways [cph], Alberta Biodiversity Monitoring Institute [cph]

sdmEvalToolUI_0.0.1.tar.gz
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sdmEvalToolUI_0.0.1.tar.gz(r-4.7-any)sdmEvalToolUI_0.0.1.tar.gz(r-4.6-any)
sdmEvalToolUI_0.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
sdmEvalToolUI/json (API)

# Install 'sdmEvalToolUI' in R:
install.packages('sdmEvalToolUI', repos = c('https://psolymos.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/landscitech/sdmevaluationtool/issues

On CRAN:

Conda:

3.69 score 1 stars 13 scripts 139 exports 109 dependencies

Last updated from:32444f2dd7. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develOK210
source / vignettesOK262
linux-releaseOK197
macos-releaseOK135
macos-oldrelOK125
windows-develOK109
windows-releaseOK131
windows-oldrelOK117
wasm-releaseOK164

Exports:add_controladd_markersadd_rasteradd_selected_markersadd_selected_subunitsadd_subunitsaffirmativeapp_materialsapp_usersbase_mapcheck_q_mismatchcoords_to_polydb_connect_checkdeployment_subunits_mapdeployment_subunits_prepevals_answeredevals_detailsevals_extractevals_listevals_tablefetch_questionsfmt_speciesfmt_timeget_material_settingshave_dataidentical_looseinput_to_valuelangmap_has_groupmap_reactive_valsmod_comp_deployment_subunits_servermod_comp_deployment_subunits_uimod_comp_model_fit_servermod_comp_model_fit_uimod_comp_model_summary_servermod_comp_model_summary_uimod_comp_obs_chart_servermod_comp_obs_chart_uimod_comp_observations_servermod_comp_observations_uimod_comp_predictor_metadata_servermod_comp_predictor_metadata_uimod_comp_predictor_raster_servermod_comp_predictor_raster_uimod_comp_spatial_prediction_servermod_comp_spatial_prediction_uimod_comp_template_servermod_comp_template_spatial_servermod_comp_template_spatial_uimod_comp_template_uimod_page_model_servermod_page_model_uimod_page_observations_servermod_page_observations_uimod_page_overview_servermod_page_overview_uimod_page_predictions_servermod_page_predictions_uimod_page_predictors_servermod_page_predictors_uimod_page_summary_servermod_page_summary_uimod_page_template_servermod_page_template_spatial_servermod_page_template_spatial_uimod_page_template_uimod_page_test_servermod_page_test_uimod_utils_details_servermod_utils_details_uimod_utils_evaluations_servermod_utils_evaluations_uimod_utils_map_selections_servermod_utils_map_selections_uimod_utils_map_sync_servermodel_fit_prepmodel_fit_tablemodel_summary_prepmodel_summary_tablenamed_idsobs_mapobs_map_pointsobs_map_rasterobs_prepobs_prep_pointsobs_prep_rasterparent_valspredictor_metadata_preppredictor_metadata_tablepredictor_raster_layerpredictor_raster_mappredictor_raster_prepprep_deploymentsprep_evaluationsprep_filesprep_material_settingsprep_materialsprep_questionsresponse_to_jsonsave_evaluationssdm_cardsdm_card_headersdm_layout_sidebarsdm_nav_panelsdm_spinnersdm_themesdm_toolsdm_tooltipset_optionsshow_spatialskip_if_no_dataspatial_prediction_mapspatial_prediction_preptemplate_preptemplate_spatial_maptemplate_spatial_preptemplate_tabletest_comptest_comp_deployment_subunitstest_comp_model_fittest_comp_model_summarytest_comp_obs_charttest_comp_observationstest_comp_predictor_metadatatest_comp_predictor_rastertest_comp_spatial_predictiontest_comp_templatetest_comp_template_spatialtest_evaluation_bodytest_input_evalstest_pagetest_pointstest_questionstest_rastertt_material_settingsui_questionsui_questions_updatevalidate_idsvalue_to_input

Dependencies:arrowaskpassassertthatbase64encbillboarderbitbit64blobbsiconsbslibcachemclassclassIntclicommonmarkcpp11crosstalkcurldata.tableDBIdbplyrdigestdplyrDTe1071evaluatefarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetshttpuvhttrisobandjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevalleafletleaflet.extrasleaflet.providerslifecycleloremmagrittrmemoisemimeopensslotelpillarpkgconfigplotlypngpromisesproxypurrrR.methodsS3R.ooR.utilsR6rappdirsrasterRColorBrewerRcppreactablereactRrlangrmarkdownRSQLites2S7sassscalesscryptsdmEvalToolCoresfshinyshinycssloadersshinyjsshinymanagersourcetoolsspstringistringrsuntoolssysterratibbletidyrtidyselecttinytexunitsutf8vctrsviridisLitewithrwkxfunxtableyaml

Readme and manuals

Help Manual

Help pageTopics
Add Layers control to mapadd_control
Add point markers to Leaflet mapadd_markers
Add raster as image layer to leaflet mapadd_raster
Add selected point markers to Leaflet mapadd_selected_markers
Add selected subunits to Leaflet mapadd_selected_subunits
Add subunits to Leaflet mapadd_subunits
Evaluation answers in the affirmativeaffirmative
Get all materials availableapp_materials
Get Users detailsapp_users
Base Map with Provider Tilesbase_map
SDM tool versions of bslib functionsbslib_wrapper sdm_card sdm_card_header sdm_layout_sidebar sdm_nav_panel
Compare number of questionscheck_q_mismatch
Convert coordinates to polygoncoords_to_poly
db connect with checkdb_connect_check
Create a Leaflet Map of Subunitsdeployment_subunits_map
Prepare Deployment Subunitsdeployment_subunits_prep
Calculate number of answered questionsevals_answered
Get Evaluation Details for Userevals_details
Extract evaluations from JSONevals_extract
Convert questions to input list structureevals_list
Create a Reactable Overview tableevals_table
Extract feature idsfeature_ids
Low-level function to read in questions.fetch_questions
Format species display namesfmt_species
Format time nicely for humansfmt_time
Get Material Settingsget_material_settings
Have local data?have_data
Loosely test if identicalidentical_loose
Helper function to format Shiny Input names as Question Valuesinput_to_value
Return the app languagelang
Check if a group exists in mapmap_has_group
Create reactive vals and keep updatedmap_reactive_vals
Deployment Subunits component Servermod_comp_deployment_subunits_server
Deployment Subunits Component UImod_comp_deployment_subunits_ui
Model Fit Component Servermod_comp_model_fit_server
Model Fit Component UImod_comp_model_fit_ui
Model Summary component Servermod_comp_model_summary_server
Model Summary Component UImod_comp_model_summary_ui
Observations Chart Component Servermod_comp_obs_chart_server
Observations Chart Component UImod_comp_obs_chart_ui
Observations component Servermod_comp_observations_server
Observations Component UImod_comp_observations_ui
Predictor Metadata component Servermod_comp_predictor_metadata_server
Predictor Metadata Component UImod_comp_predictor_metadata_ui
Predictor Raster component Servermod_comp_predictor_raster_server
Predictor Raster Component UImod_comp_predictor_raster_ui
Spatial Prediction component Servermod_comp_spatial_prediction_server
Spatial Prediction Component UImod_comp_spatial_prediction_ui
Template component Servermod_comp_template_server
Template Spatial component Servermod_comp_template_spatial_server
Template Spatial Component UImod_comp_template_spatial_ui
Template Component UImod_comp_template_ui
Model Page Servermod_page_model_server
Model Page UImod_page_model_ui
Observations Page Servermod_page_observations_server
Observations Page UImod_page_observations_ui
Overview Page Servermod_page_overview_server
Overview Page UImod_page_overview_ui
Predictions Page Servermod_page_predictions_server
Predictions Page UImod_page_predictions_ui
Predictors Page Servermod_page_predictors_server
Predictors Page UImod_page_predictors_ui
Summary Page Servermod_page_summary_server
Summary Page UImod_page_summary_ui
Template Page Servermod_page_template_server
Template Page Servermod_page_template_spatial_server
Template Spatial Page UImod_page_template_spatial_ui
Template Page UImod_page_template_ui
Test Page Servermod_page_test_server
Test Page UImod_page_test_ui
Utility Module 'Details' Servermod_utils_details_server
Utility Module 'Details' UImod_utils_details_ui
Utility Module 'Evaluations' Servermod_utils_evaluations_server
Utility Module 'Evaluations' UImod_utils_evaluations_ui
Utility Module 'Map Selections' Servermod_utils_map_selections_server
Utility Module 'Map Selections' UImod_utils_map_selections_ui
Utility Module 'Map Synchronization' Servermod_utils_map_sync_server
Prepare Model Fit Datamodel_fit_prep
Create a Table for Model Fit Datamodel_fit_table
Prepare Model Summary Datamodel_summary_prep
Create a Table for Model Summary Datamodel_summary_table
Create named lists of ids for input selectionsnamed_ids
Create a Leaflet Map of Observation Dataobs_map
Create a Leaflet Map of Observation Point Dataobs_map_points
Create a Leaflet Map of Observation Raster Dataobs_map_raster
Prepare Observation Dataobs_prep
Prepare points from Observation point dataobs_prep_points
Prepare raster from Observation point dataobs_prep_raster
Create vector of values to use downstreamparent_vals
Prepare Predictor Metadata Datapredictor_metadata_prep
Create a Table for Predictor Metadatapredictor_metadata_table
Add a Prediction Raster Layer to an existing mappredictor_raster_layer
Create a Leaflet Map of Predictor Raster Datapredictor_raster_map
Prepare Predictor Raster Datapredictor_raster_prep
Prepare Deploymentsprep_deployments
Fetch and format submitted evaluationsprep_evaluations
Generic file prepprep_files
Prepare Material Settingsprep_material_settings
Load material filesprep_materials
Prepare Evaluation Questionsprep_questions
Create JSON evaluation bodyresponse_to_json
Save evaluationssave_evaluations
Create spinner when loading UI elementssdm_spinner
Theme for bslibsdm_theme
Launch the SDM Evaluation Tool Shiny Applicationsdm_tool
Generate tool tipsdm_tooltip
Set sdmEvalTool optionsset_options
Get a list of selected spatial areasshow_spatial
Skip testthat tests if no data is detectedskip_if_no_data
Create a Leaflet Map of Spatial Prediction Dataspatial_prediction_map
Prepare Spatial Prediction Dataspatial_prediction_prep
Prepare Template Datatemplate_prep
Create a Leaflet Map of Template Spatial Datatemplate_spatial_map
Prepare Template Spatial Datatemplate_spatial_prep
Create a Table for Template Datatemplate_table
Create Test App for Component Modulestest_comp
Test the Deployment Subunits Componenttest_comp_deployment_subunits
Test the Model Fit Componenttest_comp_model_fit
Test the Model Summary Componenttest_comp_model_summary
Test the Observations Chart Componenttest_comp_obs_chart
Test the Observations Componenttest_comp_observations
Test the Predictor Metadata Componenttest_comp_predictor_metadata
Test the Predictor Raster Componenttest_comp_predictor_raster
Test the Spatial Prediction Componenttest_comp_spatial_prediction
Test the Template Componenttest_comp_template
Test the Template Spatial Componenttest_comp_template_spatial
Create dummy json evaluation bodytest_evaluation_body
Create dummy input values for evaluationstest_input_evals
Create Test App for Page Modulestest_page
Create dummy sf point datatest_points
Create dummy questions for testingtest_questions
Create dummy terra SpatRaster datatest_raster
Create tooltip from material settingstt_material_settings
Create dynamic question inputsui_questions
Update existing Spatial Shiny inputsui_questions_update
Validate input idsvalidate_ids
Helper function to format Question values as Shiny Input namesvalue_to_input