Package: mefa 3.2-9

mefa: Multivariate Data Handling in Ecology and Biogeography

A framework package aimed to provide standardized computational environment for specialist work via object classes to represent the data coded by samples, taxa and segments (i.e. subpopulations, repeated measures). It supports easy processing of the data along with cross tabulation and relational data tables for samples and taxa. An object of class `mefa' is a project specific compendium of the data and can be easily used in further analyses. Methods are provided for extraction, aggregation, conversion, plotting, summary and reporting of `mefa' objects. Reports can be generated in plain text or LaTeX format. Vignette contains worked examples.

Authors:Peter Solymos [cre, aut]

mefa_3.2-9.tar.gz
mefa_3.2-9.zip(r-4.5)mefa_3.2-9.zip(r-4.4)mefa_3.2-9.zip(r-4.3)
mefa_3.2-9.tgz(r-4.4-any)mefa_3.2-9.tgz(r-4.3-any)
mefa_3.2-9.tar.gz(r-4.5-noble)mefa_3.2-9.tar.gz(r-4.4-noble)
mefa_3.2-9.tgz(r-4.4-emscripten)mefa_3.2-9.tgz(r-4.3-emscripten)
mefa.pdf |mefa.html✨
mefa/json (API)

# Install 'mefa' in R:
install.packages('mefa', repos = c('https://psolymos.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/psolymos/mefa/issues

Datasets:

On CRAN:

4.80 score 2 stars 2 packages 104 scripts 702 downloads 1 mentions 37 exports 0 dependencies

Last updated 6 months agofrom:141fa706b7. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 17 2024
R-4.5-winOKNov 17 2024
R-4.5-linuxOKNov 17 2024
R-4.4-winOKNov 17 2024
R-4.4-macOKNov 17 2024
R-4.3-winOKNov 17 2024
R-4.3-macOKNov 17 2024

Exports:aoplotas.mefaas.Mefaas.stcsas.Xtabcdropfill.nais.distis.mefais.stcslabellabel<-mat2listmefamefaCheckmefaComparemefaCrosstabmefadocsmefalogomefaNestedlessmefaTablesmefawebmeltmfillmsrmssmtrmtsqvectorrdropreportsampsegmstcstaxavec2distxtab

Dependencies:

Readme and manuals

Help Manual

Help pageTopics
Extract and Aggregate Objects of Class 'mefa'aggregate.mefa samp segm taxa xtab [.mefa
Abundance-Occupancy Plotaoplot aoplot.default
Manipulation Tools for Class 'dist'is.dist stack.dist vec2dist
Conversion Among Various Object Classesas.array.mefa as.data.frame.mefa as.data.frame.stcs as.list.mefa as.matrix.mefa as.Mefa as.mefa as.mefa.array as.mefa.default as.mefa.list as.stcs as.stcs.default as.Xtab msr mss mtr mts
The Dolina Datasetdol.count dol.samp dol.taxa
Replace <NA> Values with Nearest Above Valuesfill.na
Image Plot of a 'dist' Objectimage.dist
Assign Label to an Object and Return Itlabel label<-
Matrix Manipulation Toolscdrop mat2list mfill rdrop
Create an Object of Class 'mefa'mefa-package dim.mefa dimnames.mefa is.mefa mefa print.mefa print.summary.mefa summary.mefa
Check and Compare Object(s) of Class 'mefa'mefaCheck mefaCompare
Cross Tabulate an Object of Class 'stcs'mefaCrosstab
Display Package Documentationmefadocs
Schematic Plot of an Object of Class 'mefa'mefalogo
Make Non-Nested 'mefa' ObjectmefaNestedless
Subsetting and Ordering of Related Data TablesmefaTables
Open 'mefa' Websitemefaweb
Melt (Convert) an Object of Class 'mefa' Into 'stcs'melt melt.mefa
Plotting Methods for Object of Class 'mefa' and 'stcs'boxplot.mefa boxplot.stcs image.mefa image.stcs plot.mefa plot.stcs
Ordinal Transformation of a Vectorqvector
Inflate (repeat) a Data Framerep.data.frame
Write Report of an Object of Class 'mefa' into Filereport report.mefa
Create an Object of Class 'stcs'is.stcs stcs summary.stcs